IL_9RHU_067

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

A(OMU)UG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|A|1288
9RHU|1|A1|OMU|1289
9RHU|1|A1|U|1290
9RHU|1|A1|G|1291
*
9RHU|1|A1|C|1310
9RHU|1|A1|U|1311
9RHU|1|A1|C|1312
9RHU|1|A1|G|1313
9RHU|1|A1|A|1314
9RHU|1|A1|U|1315

Current chains

Chain A1

18S rRNA

Nearby chains

Chain D1

Ubiquitin-ribosomal protein eS31 fusion protein

Chain H1

Small ribosomal subunit protein uS14

Chain V1

eS10

Chain X1

Small ribosomal subunit protein eS12