IL_9RHU_083

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

9RHU|1|A1|A|1581, 9RHU|1|A1|C|1582

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|G|1551
9RHU|1|A1|U|1552
9RHU|1|A1|G|1553
9RHU|1|A1|C|1554
9RHU|1|A1|C|1555
9RHU|1|A1|U|1556
9RHU|1|A1|A|1557
9RHU|1|A1|C|1558
9RHU|1|A1|C|1559
*
9RHU|1|A1|G|1578
9RHU|1|A1|U|1579
9RHU|1|A1|A|1580
9RHU|1|A1|A|1581
9RHU|1|A1|C|1582
9RHU|1|A1|C|1583

Current chains

Chain A1

18S rRNA

Nearby chains

Chain H1

Small ribosomal subunit protein uS14

Chain O1

Small ribosomal subunit protein uS3

Chain V1

eS10

Chain f1

Small ribosomal subunit protein uS10