IL_9RHU_091
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CGAU*AGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RHU_091 not in the Motif Atlas
- Homologous match to IL_9PN5_225
- Geometric discrepancy: 0.0571
- The information below is about IL_9PN5_225
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.5
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 50
Unit IDs
9RHU|1|A1|C|1718
9RHU|1|A1|G|1719
9RHU|1|A1|A|1720
9RHU|1|A1|U|1721
*
9RHU|1|A1|A|1814
9RHU|1|A1|G|1815
9RHU|1|A1|A|1816
9RHU|1|A1|G|1817
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain A3
- Large subunit ribosomal RNA; LSU rRNA
- Chain l1
- Small ribosomal subunit protein eS32
Coloring options: