IL_9RHU_093
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- UUA*U(OMU)G
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RHU_093 not in the Motif Atlas
- Homologous match to IL_9PN5_227
- Geometric discrepancy: 0.2114
- The information below is about IL_9PN5_227
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_55553.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
9RHU|1|A1|U|1730
9RHU|1|A1|U|1731
9RHU|1|A1|A|1732
*
9RHU|1|A1|U|1804
9RHU|1|A1|OMU|1805
9RHU|1|A1|G|1806
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain A3
- Large subunit ribosomal RNA; LSU rRNA
- Chain R2
- Ribosomal protein L23
- Chain T1
- 40S ribosomal protein S8
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