IL_9RHU_123

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9RHU|1|A3|U|467, 9RHU|1|A3|U|681

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|A|466
9RHU|1|A3|U|467
9RHU|1|A3|U|468
9RHU|1|A3|C|469
9RHU|1|A3|A|470
9RHU|1|A3|A|471
9RHU|1|A3|C|472
*
9RHU|1|A3|G|676
9RHU|1|A3|C|677
9RHU|1|A3|G|678
9RHU|1|A3|C|679
9RHU|1|A3|A|680
9RHU|1|A3|U|681
9RHU|1|A3|U|682
9RHU|1|A3|U|683

Current chains

Chain A3

28S rRNA

Nearby chains

Chain A2

60S ribosomal protein L6

Chain l2

[histone H4]-N-methyl-L-lysine20 N-methyltransferase KMT5B