IL_9RHU_136

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

9RHU|1|A3|A|831, 9RHU|1|A3|A|834, 9RHU|1|A3|C|836

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|A|726
9RHU|1|A3|A|727
9RHU|1|A3|G|728
9RHU|1|A3|G|729
*
9RHU|1|A3|C|827
9RHU|1|A3|A|828
9RHU|1|A3|G|829
9RHU|1|A3|C|830
9RHU|1|A3|A|831
9RHU|1|A3|G|832
9RHU|1|A3|C|833
9RHU|1|A3|A|834
9RHU|1|A3|G|835
9RHU|1|A3|C|836
9RHU|1|A3|U|837

Current chains

Chain A3

28S rRNA

Nearby chains

Chain F3

Large ribosomal subunit protein uL4

Chain I2

60S ribosomal protein L14

Chain O2

Large ribosomal subunit protein eL20