IL_9RHU_152
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RHU_152 not in the Motif Atlas
- Homologous match to IL_8GLP_052
- Geometric discrepancy: 0.1875
- The information below is about IL_8GLP_052
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.5
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 50
Unit IDs
9RHU|1|A3|C|1386
9RHU|1|A3|G|1387
9RHU|1|A3|A|1388
9RHU|1|A3|G|1389
*
9RHU|1|A3|C|1405
9RHU|1|A3|G|1406
9RHU|1|A3|A|1407
9RHU|1|A3|G|1408
Current chains
- Chain A3
- 28S rRNA
Nearby chains
- Chain M2
- eL18
Coloring options: