IL_9RHU_158

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

(OMG)A(A2M)AG*CUAGUAGC

Length

13 nucleotides

Bulged bases

9RHU|1|A3|A|1605, 9RHU|1|A3|G|1609

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|OMG|1477
9RHU|1|A3|A|1478
9RHU|1|A3|A2M|1479
9RHU|1|A3|A|1480
9RHU|1|A3|G|1481
*
9RHU|1|A3|C|1603
9RHU|1|A3|U|1604
9RHU|1|A3|A|1605
9RHU|1|A3|G|1606
9RHU|1|A3|U|1607
9RHU|1|A3|A|1608
9RHU|1|A3|G|1609
9RHU|1|A3|C|1610

Current chains

Chain A3

28S rRNA

Nearby chains

Chain F3

Large ribosomal subunit protein uL4

Chain H2

Large ribosomal subunit protein eL13

Chain J2

Ribosomal protein L15

Chain W2

60S ribosomal protein L27a

Chain f2

Ribosomal protein L37