IL_9RHU_165
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- UUU*A(PSU)A
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RHU_165 not in the Motif Atlas
- Homologous match to IL_9H3G_040
- Geometric discrepancy: 0.057
- The information below is about IL_9H3G_040
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_71625.6
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 81
Unit IDs
9RHU|1|A3|U|1626
9RHU|1|A3|U|1627
9RHU|1|A3|U|1628
*
9RHU|1|A3|A|1637
9RHU|1|A3|PSU|1638
9RHU|1|A3|A|1639
Current chains
- Chain A3
- 28S rRNA
Nearby chains
- Chain H2
- Large ribosomal subunit protein eL13
- Chain M2
- eL18
- Chain P2
- 60S ribosomal protein L21
- Chain W2
- 60S ribosomal protein L27a
- Chain X2
- 60S ribosomal protein L29
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