IL_9RHU_171

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GCGAA(PSU)*AAAC

Length

10 nucleotides

Bulged bases

9RHU|1|A3|G|1680

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|G|1678
9RHU|1|A3|C|1679
9RHU|1|A3|G|1680
9RHU|1|A3|A|1681
9RHU|1|A3|A|1682
9RHU|1|A3|PSU|1683
*
9RHU|1|A3|A|1725
9RHU|1|A3|A|1726
9RHU|1|A3|A|1727
9RHU|1|A3|C|1728

Current chains

Chain A3

28S rRNA

Nearby chains

Chain B3

5S ribosomal RNA; 5S rRNA

Chain E2

60S ribosomal protein L10

Chain G3

Large ribosomal subunit protein uL18

Chain P2

60S ribosomal protein L21