IL_9RHU_192

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CCUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

9RHU|1|A3|U|2148

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|C|2145
9RHU|1|A3|C|2146
9RHU|1|A3|U|2147
9RHU|1|A3|U|2148
9RHU|1|A3|G|2149
9RHU|1|A3|A|2150
9RHU|1|A3|A|2151
9RHU|1|A3|G|2152
*
9RHU|1|A3|U|2172
9RHU|1|A3|G|2173
9RHU|1|A3|G|2174
9RHU|1|A3|A|2175
9RHU|1|A3|G|2176

Current chains

Chain A3

28S rRNA

Nearby chains

Chain C3

5.8S ribosomal RNA; 5.8S rRNA

Chain F3

Large ribosomal subunit protein uL4

Chain U2

Ribosomal protein L26

Chain a2

Ribosomal protein L32