IL_9RHU_240

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

U(PSU)GA*(PSU)ACA

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|U|4041
9RHU|1|A3|PSU|4042
9RHU|1|A3|G|4043
9RHU|1|A3|A|4044
*
9RHU|1|A3|PSU|4058
9RHU|1|A3|A|4059
9RHU|1|A3|C|4060
9RHU|1|A3|A|4061

Current chains

Chain A3

28S rRNA

Nearby chains

Chain G3

Large ribosomal subunit protein uL18

Chain M2

eL18

Chain P2

60S ribosomal protein L21

Chain X2

60S ribosomal protein L29

Chain j2

Ribosomal protein L36a