IL_9RHU_278
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- AGAG*CGAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RHU_278 not in the Motif Atlas
- Homologous match to IL_8GLP_179
- Geometric discrepancy: 0.052
- The information below is about IL_8GLP_179
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.5
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 50
Unit IDs
9RHU|1|A3|A|4753
9RHU|1|A3|G|4754
9RHU|1|A3|A|4755
9RHU|1|A3|G|4756
*
9RHU|1|A3|C|4771
9RHU|1|A3|G|4772
9RHU|1|A3|A|4773
9RHU|1|A3|U|4774
Current chains
- Chain A3
- 28S rRNA
Nearby chains
- Chain N2
- Ribosomal protein L19
- Chain T1
- 40S ribosomal protein S8
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