IL_9RJA_136

3D structure

PDB id

9RJA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Manikomycin bound to the Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.45 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RJA|1|a|U|1851
9RJA|1|a|U|1852
9RJA|1|a|A|1853
9RJA|1|a|A|1854
9RJA|1|a|U|1855
9RJA|1|a|U|1856
9RJA|1|a|G|1857
9RJA|1|a|A|1858
9RJA|1|a|U|1859
9RJA|1|a|G|1860
*
9RJA|1|a|U|1882
9RJA|1|a|U|1883
9RJA|1|a|G|1884
9RJA|1|a|A|1885
9RJA|1|a|U|1886
9RJA|1|a|C|1887
9RJA|1|a|G|1888
9RJA|1|a|A|1889
9RJA|1|a|A|1890
9RJA|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains