IL_9RPF_010
3D structure
- PDB id
- 9RPF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and mS37 (State M4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- GCACG*CAGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RPF_010 not in the Motif Atlas
- Geometric match to IL_4WF9_029
- Geometric discrepancy: 0.3996
- The information below is about IL_4WF9_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01742.1
- Basepair signature
- cWW-L-cWW-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
9RPF|1|A|G|762
9RPF|1|A|C|763
9RPF|1|A|A|764
9RPF|1|A|C|765
9RPF|1|A|G|766
*
9RPF|1|A|C|775
9RPF|1|A|A|776
9RPF|1|A|G|777
9RPF|1|A|C|778
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 0
- 28S ribosomal protein S34, mitochondrial
- Chain 3
- Aurora kinase A-interacting protein
- Chain L
- 28S ribosomal protein S15, mitochondrial
- Chain N
- 28S ribosomal protein S17, mitochondrial
Coloring options: