IL_9RPV_245

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CGCCCGAU*GG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|M5|C|1911
9RPV|1|M5|G|1912
9RPV|1|M5|C|1913
9RPV|1|M5|C|1914
9RPV|1|M5|C|1915
9RPV|1|M5|G|1916
9RPV|1|M5|A|1917
9RPV|1|M5|U|1918
*
9RPV|1|M5|G|2064
9RPV|1|M5|G|2065

Current chains

Chain M5

28S rRNA of the stalled 80S

Nearby chains

Chain MF

Large ribosomal subunit protein uL30

Chain MO

60S ribosomal protein L13a

Chain MS

60S ribosomal protein L18a

Chain Mf

60S ribosomal protein L35a