IL_9RPV_251

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

UAUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

9RPV|1|M5|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|M5|U|1957
9RPV|1|M5|A|1958
9RPV|1|M5|U|1959
9RPV|1|M5|A|1960
9RPV|1|M5|G|1961
9RPV|1|M5|A|1962
9RPV|1|M5|C|1963
9RPV|1|M5|A|1964
9RPV|1|M5|G|1965
*
9RPV|1|M5|C|2022
9RPV|1|M5|C|2023
9RPV|1|M5|G|2024
9RPV|1|M5|A|2025
9RPV|1|M5|A|2026

Current chains

Chain M5

28S rRNA of the stalled 80S

Nearby chains

Chain MS

60S ribosomal protein L18a

Chain Mm

Ubiquitin-ribosomal protein eL40 fusion protein