IL_9RPV_284

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

(PSU)CA(A2M)AGU*AA(PSU)GAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|M5|PSU|3715
9RPV|1|M5|C|3716
9RPV|1|M5|A|3717
9RPV|1|M5|A2M|3718
9RPV|1|M5|A|3719
9RPV|1|M5|G|3720
9RPV|1|M5|U|3721
*
9RPV|1|M5|A|3732
9RPV|1|M5|A|3733
9RPV|1|M5|PSU|3734
9RPV|1|M5|G|3735
9RPV|1|M5|A|3736
9RPV|1|M5|A|3737
9RPV|1|M5|G|3738

Current chains

Chain M5

28S rRNA of the stalled 80S

Nearby chains

Chain E5

Transfer RNA; tRNA

Chain MA

Large ribosomal subunit protein uL2

Chain Mi

60S ribosomal protein L36

Chain Mo

Large ribosomal subunit protein eL42