IL_9RPV_337
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- AUCUC*GAUCU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RPV_337 not in the Motif Atlas
- Homologous match to IL_4V9F_104
- Geometric discrepancy: 0.1382
- The information below is about IL_4V9F_104
- Detailed Annotation
- Symmetric double minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.12
- Basepair signature
- cWW-cSH-cWS-L-tSW-R-R-cWW
- Number of instances in this motif group
- 12
Unit IDs
9RPV|1|M7|A|32
9RPV|1|M7|U|33
9RPV|1|M7|C|34
9RPV|1|M7|U|35
9RPV|1|M7|C|36
*
9RPV|1|M7|G|41
9RPV|1|M7|A|42
9RPV|1|M7|U|43
9RPV|1|M7|C|44
9RPV|1|M7|U|45
Current chains
- Chain M7
- 5S rRNA
Nearby chains
- Chain M5
- Large subunit ribosomal RNA; LSU rRNA
- Chain MD
- 60S ribosomal protein L5
- Chain MJ
- 60S ribosomal protein L11
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