IL_9RPV_360

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

UAUCAA*UGACCACG

Length

14 nucleotides

Bulged bases

9RPV|1|S2|U|361, 9RPV|1|S2|C|399

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S2|U|359
9RPV|1|S2|A|360
9RPV|1|S2|U|361
9RPV|1|S2|C|362
9RPV|1|S2|A|363
9RPV|1|S2|A|364
*
9RPV|1|S2|U|396
9RPV|1|S2|G|397
9RPV|1|S2|A|398
9RPV|1|S2|C|399
9RPV|1|S2|C|400
9RPV|1|S2|A|401
9RPV|1|S2|C|402
9RPV|1|S2|G|403

Current chains

Chain S2

18S rRNA of the collided 80S

Nearby chains

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11

Chain SX

40S ribosomal protein S23