IL_9RPV_402

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GGAGUAUG*UGAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S2|G|1168
9RPV|1|S2|G|1169
9RPV|1|S2|A|1170
9RPV|1|S2|G|1171
9RPV|1|S2|U|1172
9RPV|1|S2|A|1173
9RPV|1|S2|U|1174
9RPV|1|S2|G|1175
*
9RPV|1|S2|U|1186
9RPV|1|S2|G|1187
9RPV|1|S2|A|1188
9RPV|1|S2|A|1189
9RPV|1|S2|A|1190
9RPV|1|S2|C|1191

Current chains

Chain S2

18S rRNA of the collided 80S

Nearby chains

Chain Ln

60S ribosomal protein L41

Chain SX

40S ribosomal protein S23