IL_9RPV_444
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- UCUAAG*CUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RPV_444 not in the Motif Atlas
- Homologous match to IL_9PN5_147
- Geometric discrepancy: 0.0735
- The information below is about IL_9PN5_147
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61299.9
- Basepair signature
- cWW-cWH-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9RPV|1|S3|U|57
9RPV|1|S3|C|58
9RPV|1|S3|U|59
9RPV|1|S3|A|60
9RPV|1|S3|A|61
9RPV|1|S3|G|62
*
9RPV|1|S3|C|86
9RPV|1|S3|U|87
9RPV|1|S3|G|88
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain RE
- Small ribosomal subunit protein eS4, X isoform
- Chain RG
- 40S ribosomal protein S6
- Chain RY
- 40S ribosomal protein S24
Coloring options: