IL_9RPV_468

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GAG*CGAGG(A2M)UC

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S3|G|563
9RPV|1|S3|A|564
9RPV|1|S3|G|565
*
9RPV|1|S3|C|585
9RPV|1|S3|G|586
9RPV|1|S3|A|587
9RPV|1|S3|G|588
9RPV|1|S3|G|589
9RPV|1|S3|A2M|590
9RPV|1|S3|U|591
9RPV|1|S3|C|592

Current chains

Chain S3

18S rRNA of the stalled 80S

Nearby chains

Chain RJ

40S ribosomal protein S9

Chain Re

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein