IL_9RPV_476
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- CGUAG*UCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RPV_476 not in the Motif Atlas
- Homologous match to IL_9PN5_176
- Geometric discrepancy: 0.0867
- The information below is about IL_9PN5_176
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.4
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 21
Unit IDs
9RPV|1|S3|C|676
9RPV|1|S3|G|677
9RPV|1|S3|U|678
9RPV|1|S3|A|679
9RPV|1|S3|G|680
*
9RPV|1|S3|U|1025
9RPV|1|S3|C|1026
9RPV|1|S3|A|1027
9RPV|1|S3|A|1028
9RPV|1|S3|G|1029
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain M5
- Large subunit ribosomal RNA; LSU rRNA
- Chain RL
- 40S ribosomal protein S11
- Chain RN
- 40S ribosomal protein S13
- Chain RW
- 40S ribosomal protein S15a
- Chain RX
- 40S ribosomal protein S23
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