IL_9RPV_487

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GCUAG*CUUGGACC

Length

13 nucleotides

Bulged bases

9RPV|1|S3|G|970

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S3|G|952
9RPV|1|S3|C|953
9RPV|1|S3|U|954
9RPV|1|S3|A|955
9RPV|1|S3|G|956
*
9RPV|1|S3|C|967
9RPV|1|S3|U|968
9RPV|1|S3|U|969
9RPV|1|S3|G|970
9RPV|1|S3|G|971
9RPV|1|S3|A|972
9RPV|1|S3|C|973
9RPV|1|S3|C|974

Current chains

Chain S3

18S rRNA of the stalled 80S

Nearby chains

Chain M5

Large subunit ribosomal RNA; LSU rRNA

Chain RB

40S ribosomal protein S3a

Chain RO

40S ribosomal protein S14