IL_9RPV_488

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

AGGUUC*GUU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S3|A|1042
9RPV|1|S3|G|1043
9RPV|1|S3|G|1044
9RPV|1|S3|U|1045
9RPV|1|S3|U|1046
9RPV|1|S3|C|1047
*
9RPV|1|S3|G|1071
9RPV|1|S3|U|1072
9RPV|1|S3|U|1073

Current chains

Chain S3

18S rRNA of the stalled 80S

Nearby chains

Chain M5

Large subunit ribosomal RNA; LSU rRNA

Chain MA

Large ribosomal subunit protein uL2

Chain RO

40S ribosomal protein S14

Chain Ra

40S ribosomal protein S26