IL_9RPV_506
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- UGG*UCUGUGA
- Length
- 10 nucleotides
- Bulged bases
- 9RPV|1|S3|U|1494, 9RPV|1|S3|G|1497
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RPV_506 not in the Motif Atlas
- Homologous match to IL_9H3G_221
- Geometric discrepancy: 0.108
- The information below is about IL_9H3G_221
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09439.2
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
9RPV|1|S3|U|1333
9RPV|1|S3|G|1334
9RPV|1|S3|G|1335
*
9RPV|1|S3|U|1492
9RPV|1|S3|C|1493
9RPV|1|S3|U|1494
9RPV|1|S3|G|1495
9RPV|1|S3|U|1496
9RPV|1|S3|G|1497
9RPV|1|S3|A|1498
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain RD
- 40S ribosomal protein S3
- Chain RK
- 40S ribosomal protein S10
- Chain RU
- 40S ribosomal protein S20
- Chain Rd
- 40S ribosomal protein S29
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