IL_9RPV_506

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

UGG*UCUGUGA

Length

10 nucleotides

Bulged bases

9RPV|1|S3|U|1494, 9RPV|1|S3|G|1497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S3|U|1333
9RPV|1|S3|G|1334
9RPV|1|S3|G|1335
*
9RPV|1|S3|U|1492
9RPV|1|S3|C|1493
9RPV|1|S3|U|1494
9RPV|1|S3|G|1495
9RPV|1|S3|U|1496
9RPV|1|S3|G|1497
9RPV|1|S3|A|1498

Current chains

Chain S3

18S rRNA of the stalled 80S

Nearby chains

Chain RD

40S ribosomal protein S3

Chain RK

40S ribosomal protein S10

Chain RU

40S ribosomal protein S20

Chain Rd

40S ribosomal protein S29