IL_9RPV_510

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CAUGC*(OMG)AGG

Length

9 nucleotides

Bulged bases

9RPV|1|S3|U|1397

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S3|C|1395
9RPV|1|S3|A|1396
9RPV|1|S3|U|1397
9RPV|1|S3|G|1398
9RPV|1|S3|C|1399
*
9RPV|1|S3|OMG|1447
9RPV|1|S3|A|1448
9RPV|1|S3|G|1449
9RPV|1|S3|G|1450

Current chains

Chain S3

18S rRNA of the stalled 80S

Nearby chains

Chain RQ

40S ribosomal protein S16

Chain RR

40S ribosomal protein S17

Chain RU

40S ribosomal protein S20

Chain Rg

Receptor of activated protein C kinase 1