IL_9RTU_050

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

9RTU|1|A|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9RTU_050 not in the Motif Atlas

Geometric match to IL_8B0X_114

Geometric discrepancy: 0.1173

The information below is about IL_8B0X_114

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_08938.1

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

22

Unit IDs

9RTU|1|A|C|1417
9RTU|1|A|G|1418
9RTU|1|A|A|1419
9RTU|1|A|A|1420
9RTU|1|A|G|1421
*
9RTU|1|A|C|1577
9RTU|1|A|U|1578
9RTU|1|A|A|1579
9RTU|1|A|A|1580
9RTU|1|A|G|1581

Current chains

Chain A

23S ribosomal RNA

Nearby chains