3D structure

PDB id
9RTU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UCACU*AAA
Length
8 nucleotides
Bulged bases
9RTU|1|A|A|2726
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9RTU_100 not in the Motif Atlas
Geometric match to IL_8B0X_162
Geometric discrepancy: 0.1014
The information below is about IL_8B0X_162
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_63596.12
Basepair signature
cWW-cWS-cSH-tWH-cWW-L
Number of instances in this motif group
22

Unit IDs

9RTU|1|A|U|2680
9RTU|1|A|C|2681
9RTU|1|A|A|2682
9RTU|1|A|C|2683
9RTU|1|A|U|2684
*
9RTU|1|A|A|2725
9RTU|1|A|A|2726
9RTU|1|A|A|2727

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L3
Chain K
50S ribosomal protein L14
Chain N
50S ribosomal protein L17
Chain P
50S ribosomal protein L19

Coloring options:


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