IL_9RTV_040
3D structure
- PDB id
- 9RTV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCCAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 9RTV|1|A|A|1046
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RTV_040 not in the Motif Atlas
- Geometric match to IL_8B0X_104
- Geometric discrepancy: 0.1991
- The information below is about IL_8B0X_104
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.3
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9RTV|1|A|C|1043
9RTV|1|A|C|1044
9RTV|1|A|C|1045
9RTV|1|A|A|1046
9RTV|1|A|G|1047
9RTV|1|A|A|1048
9RTV|1|A|C|1049
9RTV|1|A|A|1050
9RTV|1|A|G|1051
*
9RTV|1|A|U|1108
9RTV|1|A|C|1109
9RTV|1|A|G|1110
9RTV|1|A|A|1111
9RTV|1|A|G|1112
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 5
- 50S ribosomal protein L10
- Chain G
- 50S ribosomal protein L6
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