IL_9RTV_052

3D structure

PDB id

9RTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

9RTV|1|A|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9RTV_052 not in the Motif Atlas

Homologous match to IL_7A0S_053

Geometric discrepancy: 0.169

The information below is about IL_7A0S_053

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

9RTV|1|A|C|1437
9RTV|1|A|U|1438
9RTV|1|A|A|1439
9RTV|1|A|U|1440
*
9RTV|1|A|A|1551
9RTV|1|A|A|1552
9RTV|1|A|A|1553
9RTV|1|A|U|1554
9RTV|1|A|G|1555

Current chains

Chain A

23S ribosomal RNA

Nearby chains