IL_9RTV_065

3D structure

PDB id

9RTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAUGUAG*UGAAA

Length

12 nucleotides

Bulged bases

9RTV|1|A|U|1714

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9RTV_065 not in the Motif Atlas

Geometric match to IL_8B0X_128

Geometric discrepancy: 0.0985

The information below is about IL_8B0X_128

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_82100.1

Basepair signature

cWW-tWW-cSH-tWH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

9RTV|1|A|U|1712
9RTV|1|A|A|1713
9RTV|1|A|U|1714
9RTV|1|A|G|1715
9RTV|1|A|U|1716
9RTV|1|A|A|1717
9RTV|1|A|G|1718
*
9RTV|1|A|U|1742
9RTV|1|A|G|1743
9RTV|1|A|A|1744
9RTV|1|A|A|1745
9RTV|1|A|A|1746

Current chains

Chain A

23S ribosomal RNA

Nearby chains