IL_9RTV_145
3D structure
- PDB id
- 9RTV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGAAAUCC*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 9RTV|1|a|U|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RTV_145 not in the Motif Atlas
- Homologous match to IL_6CZR_408
- Geometric discrepancy: 0.5769
- The information below is about IL_6CZR_408
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.2
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
9RTV|1|a|U|605
9RTV|1|a|G|606
9RTV|1|a|A|607
9RTV|1|a|A|608
9RTV|1|a|A|609
9RTV|1|a|U|610
9RTV|1|a|C|611
9RTV|1|a|C|612
*
9RTV|1|a|G|628
9RTV|1|a|A|629
9RTV|1|a|A|630
9RTV|1|a|C|631
9RTV|1|a|U|632
9RTV|1|a|G|633
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain d
- Small ribosomal subunit protein uS4
- Chain h
- 30S ribosomal protein S8
- Chain p
- 30S ribosomal protein S16
- Chain q
- 30S ribosomal protein S17
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