IL_9RTV_164
3D structure
- PDB id
- 9RTV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UG*CAA
- Length
- 5 nucleotides
- Bulged bases
- 9RTV|1|a|A|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RTV_164 not in the Motif Atlas
- Homologous match to IL_6CZR_156
- Geometric discrepancy: 0.2216
- The information below is about IL_6CZR_156
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
9RTV|1|a|U|1060
9RTV|1|a|G|1061
*
9RTV|1|a|C|1195
9RTV|1|a|A|1196
9RTV|1|a|A|1197
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- Small ribosomal subunit protein uS3
- Chain e
- 30S ribosomal protein S5
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
- Chain w
- Transfer RNA; tRNA
- Chain z
- mRNA
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