IL_9RU6_010
3D structure
- PDB id
- 9RU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P- and (partial) E/E-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- AAG*UAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RU6_010 not in the Motif Atlas
- Geometric match to IL_5UNE_001
- Geometric discrepancy: 0.2013
- The information below is about IL_5UNE_001
- Detailed Annotation
- Isolated non-canonical cWW contact
- Broad Annotation
- No text annotation
- Motif group
- IL_87720.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
9RU6|1|A|A|1925
9RU6|1|A|A|1926
9RU6|1|A|G|1927
*
9RU6|1|A|U|1977
9RU6|1|A|A|1978
9RU6|1|A|U|1979
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
Coloring options: