IL_9RU6_050
3D structure
- PDB id
- 9RU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P- and (partial) E/E-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- UCUAG*CAACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RU6_050 not in the Motif Atlas
- Homologous match to IL_7A0S_087
- Geometric discrepancy: 0.2511
- The information below is about IL_7A0S_087
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.4
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9RU6|1|A|U|2953
9RU6|1|A|C|2954
9RU6|1|A|U|2955
9RU6|1|A|A|2956
9RU6|1|A|G|2957
*
9RU6|1|A|C|2967
9RU6|1|A|A|2968
9RU6|1|A|A|2969
9RU6|1|A|C|2970
9RU6|1|A|A|2971
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain Aw
- A-site tRNA (68-MER)
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
Coloring options: