IL_9RU6_055

3D structure

PDB id

9RU6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P- and (partial) E/E-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

9RU6|1|A|A|3089

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9RU6_055 not in the Motif Atlas

Geometric match to IL_8UO6_001

Geometric discrepancy: 0.3307

The information below is about IL_8UO6_001

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

175

Unit IDs

9RU6|1|A|C|3078
9RU6|1|A|G|3079
*
9RU6|1|A|C|3088
9RU6|1|A|A|3089
9RU6|1|A|G|3090

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain Aw

A-site tRNA (68-MER)

Chain Ax

Transfer RNA; tRNA