IL_9RU7_094
3D structure
- PDB id
- 9RU7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAUG*CGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RU7_094 not in the Motif Atlas
- Homologous match to IL_8GLP_120
- Geometric discrepancy: 0.1615
- The information below is about IL_8GLP_120
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_67721.1
- Basepair signature
- cWW-tSW-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9RU7|1|L5|G|3710
9RU7|1|L5|A|3711
9RU7|1|L5|A|3712
9RU7|1|L5|U|3713
9RU7|1|L5|G|3714
*
9RU7|1|L5|C|3739
9RU7|1|L5|G|3740
9RU7|1|L5|C|3741
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain S6
- Transfer RNA; tRNA
Coloring options: