IL_9RU9_034
3D structure
- PDB id
- 9RU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- GCG*CCC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RU9_034 not in the Motif Atlas
- Homologous match to IL_8GLP_039
- Geometric discrepancy: 0.1654
- The information below is about IL_8GLP_039
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.7
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 240
Unit IDs
9RU9|1|L5|G|740
9RU9|1|L5|C|741
9RU9|1|L5|G|742
*
9RU9|1|L5|C|922
9RU9|1|L5|C|923
9RU9|1|L5|C|924
Current chains
- Chain L5
- 23S rRNA
Nearby chains
- Chain LM
- 60S ribosomal protein L14
Coloring options: