IL_9RU9_184

3D structure

PDB id

9RU9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GGAUAAC*GCUAA(OMU)A(OMC)

Length

15 nucleotides

Bulged bases

9RU9|1|S2|OMU|172

QA status

Modified nucleotides: OMU, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU9|1|S2|G|145
9RU9|1|S2|G|146
9RU9|1|S2|A|147
9RU9|1|S2|U|148
9RU9|1|S2|A|149
9RU9|1|S2|A|150
9RU9|1|S2|C|151
*
9RU9|1|S2|G|167
9RU9|1|S2|C|168
9RU9|1|S2|U|169
9RU9|1|S2|A|170
9RU9|1|S2|A|171
9RU9|1|S2|OMU|172
9RU9|1|S2|A|173
9RU9|1|S2|OMC|174

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24