IL_9RU9_219

3D structure

PDB id

9RU9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GCUAG*CUUGGACC

Length

13 nucleotides

Bulged bases

9RU9|1|S2|G|970

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU9|1|S2|G|952
9RU9|1|S2|C|953
9RU9|1|S2|U|954
9RU9|1|S2|A|955
9RU9|1|S2|G|956
*
9RU9|1|S2|C|967
9RU9|1|S2|U|968
9RU9|1|S2|U|969
9RU9|1|S2|G|970
9RU9|1|S2|G|971
9RU9|1|S2|A|972
9RU9|1|S2|C|973
9RU9|1|S2|C|974

Current chains

Chain S2

18S rRNA

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain SB

40S ribosomal protein S3a

Chain SO

40S ribosomal protein S14