IL_9RU9_251
3D structure
- PDB id
- 9RU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 9RU9|1|S2|C|1701, 9RU9|1|S2|A|1835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RU9_251 not in the Motif Atlas
- Homologous match to IL_9PN5_220
- Geometric discrepancy: 0.0864
- The information below is about IL_9PN5_220
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18228.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
9RU9|1|S2|C|1700
9RU9|1|S2|C|1701
9RU9|1|S2|G|1702
*
9RU9|1|S2|C|1833
9RU9|1|S2|A|1834
9RU9|1|S2|A|1835
9RU9|1|S2|G|1836
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain Pt
- Transfer RNA; tRNA
- Chain SO
- 40S ribosomal protein S14
- Chain Sa
- 40S ribosomal protein S26
- Chain mR
- Kozak mRNA
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