3D structure

PDB id
9RUA (explore in PDB, NAKB, or RNA 3D Hub)
Description
RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UGGAAUG*CGAGAGA
Length
14 nucleotides
Bulged bases
9RUA|1|L5|U|2661, 9RUA|1|L5|A|2674
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RUA|1|L5|U|2656
9RUA|1|L5|G|2657
9RUA|1|L5|G|2658
9RUA|1|L5|A|2659
9RUA|1|L5|A|2660
9RUA|1|L5|U|2661
9RUA|1|L5|G|2662
*
9RUA|1|L5|C|2672
9RUA|1|L5|G|2673
9RUA|1|L5|A|2674
9RUA|1|L5|G|2675
9RUA|1|L5|A|2676
9RUA|1|L5|G|2677
9RUA|1|L5|A|2678

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LR
60S ribosomal protein L19
Chain LZ
60S ribosomal protein L27
Chain Lc
60S ribosomal protein L30
Chain Lp
60S ribosomal protein L37a
Chain SN
40S ribosomal protein S13

Coloring options:

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