IL_9RUA_110

3D structure

PDB id

9RUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

C(5MC)AA(A2M)UGCCUC(OMG)*(OMC)GCG

Length

16 nucleotides

Bulged bases

9RUA|1|L5|A2M|3785, 9RUA|1|L5|C|3791, 9RUA|1|L5|C|3810

QA status

Modified nucleotides: 5MC, A2M, OMG, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RUA|1|L5|C|3781
9RUA|1|L5|5MC|3782
9RUA|1|L5|A|3783
9RUA|1|L5|A|3784
9RUA|1|L5|A2M|3785
9RUA|1|L5|U|3786
9RUA|1|L5|G|3787
9RUA|1|L5|C|3788
9RUA|1|L5|C|3789
9RUA|1|L5|U|3790
9RUA|1|L5|C|3791
9RUA|1|L5|OMG|3792
*
9RUA|1|L5|OMC|3808
9RUA|1|L5|G|3809
9RUA|1|L5|C|3810
9RUA|1|L5|G|3811

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Ln

Ribosomal protein L41

Chain S2

Small subunit ribosomal RNA; SSU rRNA