IL_9RUC_018

3D structure

PDB id

9RUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9RUC|1|L5|U|467, 9RUC|1|L5|C|685, 9RUC|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RUC|1|L5|A|466
9RUC|1|L5|U|467
9RUC|1|L5|U|468
9RUC|1|L5|C|469
9RUC|1|L5|A|470
9RUC|1|L5|A|471
9RUC|1|L5|C|472
*
9RUC|1|L5|G|682
9RUC|1|L5|C|683
9RUC|1|L5|G|684
9RUC|1|L5|C|685
9RUC|1|L5|A|686
9RUC|1|L5|U|687
9RUC|1|L5|U|688
9RUC|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Lr

Large ribosomal subunit protein eL28