IL_9RUC_095

3D structure

PDB id

9RUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

(PSU)CA(A2M)AGU*AA(PSU)GAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RUC|1|L5|PSU|3715
9RUC|1|L5|C|3716
9RUC|1|L5|A|3717
9RUC|1|L5|A2M|3718
9RUC|1|L5|A|3719
9RUC|1|L5|G|3720
9RUC|1|L5|U|3721
*
9RUC|1|L5|A|3732
9RUC|1|L5|A|3733
9RUC|1|L5|PSU|3734
9RUC|1|L5|G|3735
9RUC|1|L5|A|3736
9RUC|1|L5|A|3737
9RUC|1|L5|G|3738

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LA

Large ribosomal subunit protein uL2

Chain Li

60S ribosomal protein L36

Chain Lo

Large ribosomal subunit protein eL42

Chain S6

Transfer RNA; tRNA