IL_9RVC_023
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGUGCCAG*CGGUAAUACG
- Length
- 18 nucleotides
- Bulged bases
- 9RVC|1|A|A|540, 9RVC|1|A|U|542, 9RVC|1|A|A|543
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RVC|1|A|C|522
9RVC|1|A|G|523
9RVC|1|A|U|524
9RVC|1|A|G|525
9RVC|1|A|C|526
9RVC|1|A|C|527
9RVC|1|A|A|528
9RVC|1|A|G|529
*
9RVC|1|A|C|536
9RVC|1|A|G|537
9RVC|1|A|G|538
9RVC|1|A|U|539
9RVC|1|A|A|540
9RVC|1|A|A|541
9RVC|1|A|U|542
9RVC|1|A|A|543
9RVC|1|A|C|544
9RVC|1|A|G|545
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3
- Chain D
- Small ribosomal subunit protein uS4
- Chain L
- Small ribosomal subunit protein uS12
- Chain X
- spa mRNA
- Chain Y
- Transfer RNA; tRNA
Coloring options: