IL_9RVC_065
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCA*UA
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RVC_065 not in the Motif Atlas
- Geometric match to IL_9H3G_118
- Geometric discrepancy: 0.2236
- The information below is about IL_9H3G_118
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_46637.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 19
Unit IDs
9RVC|1|A|U|1544
9RVC|1|A|C|1545
9RVC|1|A|A|1546
*
9RVC|1|X|U|8
9RVC|1|X|A|9
Current chains
- Chain A
- 16S rRNA
- Chain X
- spa mRNA
Nearby chains
- Chain K
- Small ribosomal subunit protein uS11
Coloring options: