3D structure

PDB id
9RVC (explore in PDB, NAKB, or RNA 3D Hub)
Description
staphylococcus aureus 70S initiation complex with natural mRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UU*CA
Length
4 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RVC|1|A|U|1552
9RVC|1|A|U|1553
*
9RVC|1|X|C|1
9RVC|1|X|A|2

Current chains

Chain A
16S rRNA
Chain X
spa mRNA

Nearby chains

Chain B
Small ribosomal subunit protein uS2

Coloring options:

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